Running jobs on the Grid
From Research IT
These directions will help you get up and running once you have your grid certificate. Once you have completed sourcing the path
>source /network/rit/misc/grid/setup.csh or source /network/rit/misc/grid/setup.sh
Server information
We are using condor-g as the gate keeper for all of our pooled computaional resources that are maintained by the RIT Group. For additional information on condor-g see [1]
If you have questions please contact Eric or Anne by sending an email to ritgroup@albany.edu
Running an interactive grid job
The command to run a job and return it's output immediately is globus-job-run. Examples below should be self explanatory.
[ew2193@grid ~]$ globus-job-run athena.rit.albany.edu/jobmanager /bin/hostname athena.rit.albany.edu [ew2193@grid ~]$ globus-job-run athena.rit.albany.edu/jobmanager-condor /bin/hostname athena-02.rit.albany.edu
Running a grid batch job
Batch jobs return immediately without waiting for the application to finish, you will have to retrieve the output later through other commands. If you are running long jobs you may need to create a longer proxy certificate ( man grid-proxy-init ). See example below.
[ew2193@grid ~]$ globus-job-submit athena.rit.albany.edu/jobmanager /bin/hostname https://athena.rit.albany.edu:15503/22313/1133556068/ ... approx 1 minute time [ew2193@grid ~]$ globus-job-get-output https://athena.rit.albany.edu:15503/22313/1133556068/ athena.rit.albany.edu
or
[ew2193@grid ~]$ globus-job-submit athena.rit.albany.edu/jobmanager-condor /bin/hostname https://athena.rit.albany.edu:15503/23215/1133556214/ [ew2193@grid ~]$ globus-job-get-output https://athena.rit.albany.edu:15503/23215/1133556214/ athena-01.rit.albany.edu
